Microarray Database

Using this visualization tool, we have created a database of pathway images, generated from the transcriptome analysis of 38 two-component regulatory system mutants of Escherichia coli K-12 W3110 [Oshima et al., 2002]. Please click a tile of the knock out type.



Following are the color codes and how to:
SVG images can be dragged when Alt key is pressed or zoomed when Ctrl key is pressed.
On the SVG pathway, the metabolite information windows are appeared by "1" key, and the gene information windows by "3" key.





If you do not have a SVG viewer plug-in, please download theriewer by clicking the following icon



Experimental Condition
Wild type
Knock out the Wild
Knock out the arcA
Knock out the arcB
Knock out the atoSC
Knock out the baeSR
Knock out the barA
Knock out the basRS
Knock out the cheABYZ
Knock out the citAB
Knock out the cpxRA
Knock out the creABCD
Knock out the cusRS
Knock out the dcuSR
Knock out the evgAS
Knock out the fimZ
Knock out the hydHG
Knock out the kdpABCDE
Knock out the narP
Knock out the narQ
Knock out the narXL
Knock out the ntrBC
Knock out the ompRenvZ
Knock out the phoBR
Knock out the phoPQ
Knock out the rcsB
Knock out the rssB
Knock out the rstAB
Knock out the torSTRCAD
Knock out the uhpAB
Knock out the uvrY
Knock out the yedWV
Knock out the yehUT
Knock out the yfhA
Knock out the yfhK
Knock out the ygiXY
Knock out the yojN
Knock out the ypdAB




(C) 2006-2008 Institute for Advanced Biosciences, Keio University
KEGG Data used in this website is licensed by Pathway Solutions Inc.